Genomics: The Mapping And Sequencing Of Genomes

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Question 1
Free
Short Answer

Please select the best match for each term.
A)Eukaryotic cloning vector
B)Molecule used in DNA sequencing
C)Origin of replication
D)Small circular fragment of DNA
E)Endonuclease isolated from bacteria
-1)Restriction enzyme
2)ARS
3)Plasmid
4)YAC
5)Dideoxynucleotides

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Question 2
Free
Multiple Choice

When DNA is cut with a restriction enzyme,the resulting fragments have

Choose correct answer/s
A

5' carboxyls.

B

5' hydroxyls.

C

3' hydroxyls.

D

3' phosphates.

E

3' carboxyls.

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Question 3
Free
Multiple Choice

A plasmid used as a cloning vector in E.coli must have

Choose correct answer/s
A

an ori sequence.

B

a selectable marker.

C

unique restriction sites.

D

B and C

E

All of these

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Question 4
Free
Multiple Choice

Bacteria protect their own DNA from restriction enzyme damage by adding ________ groups to certain nucleotides.

Choose correct answer/s
A

methyl

B

hydroxyl

C

phosphate

D

amino

E

carboxyl

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Question 5
Free
Multiple Choice

A polylinker region in a cloning plasmid is characterized by

Choose correct answer/s
A

multiple methyl groups.

B

multiple restriction cut sites.

C

multiple reporter genes.

D

multiple expression vectors.

E

multiple cloning targets.

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Question 6
Multiple Choice

In a physical map,distances are measured in

Choose correct answer/s
A
recombination frequencies.
B
number of SNPs.
C
base pairs.
D
probabilities.
E
microns.
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Question 7
Multiple Choice

In DNA electrophoresis,fragment separation is based on

Choose correct answer/s
A
fragment size.
B
fragment nucleotide content.
C
fragment sequence.
D
fragment charge.
E
All of these
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Question 8
Multiple Choice

The chemical "label" that permits visualization of DNA fragments in an automated sequencing machine is

Choose correct answer/s
A
32P.
B
35S.
C
fluorescent dyes.
D
tritium.
E
None of these
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Question 9
Multiple Choice

A DNA copy of an mRNA molecule is called

Choose correct answer/s
A
dDNA.
B
rDNA.
C
mDNA.
D
shDNA.
E
cDNA.
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Question 10
Multiple Choice

The first complete nonviral genome sequenced was that of

Choose correct answer/s
A
Escherichia coli.
B
Methanococcus.
C
Saccharomyces cerevisiae.
D
the human mitochondrion.
E
Mus musculus.
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Question 11
Multiple Choice

Many bacteria are naturally capable of taking up endogenous fragments of DNA in their environment,a phenomenon termed

Choose correct answer/s
A
conversion.
B
transformation.
C
hybridization.
D
transfection.
E
conjugation.
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Question 12
Multiple Choice

An SNP always occurs due to

Choose correct answer/s
A
a one base-pair change.
B
a three base-pair change.
C
a single restriction site change.
D
a single amino acid change.
E
None of these
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Question 13
Multiple Choice

The recognition sequences for many restriction enzymes are

Choose correct answer/s
A
terminal repeats.
B
tandem repeats.
C
palindromic.
D
inverted repeats.
E
dual repeats.
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Question 14
Multiple Choice

In addition to restriction enzymes,which of the following enzymes is required to insert a fragment of DNA into a cloning vector?

Choose correct answer/s
A
DNA polymerase
B
DNA ligase
C
RNA polymerase
D
Reverse transcriptase
E
Topoisomerase
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Question 15
Multiple Choice

Which restriction enzyme leaves blunt ends?

Choose correct answer/s
A
XbaI
B
SmaI
C
EcoR1
D
BamHI
E
All of these
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Question 16
Multiple Choice

A restriction enzyme cuts DNA and leaves the following end: CTGCA G
Which of the following could be the sequence of the corresponding end of the other fragment generated by the enzyme?

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A
G CTGCA
B
C GTGCA
C
CCGAT G
D
GGCTA C
E
None of these
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Question 17
Multiple Choice

The ________ method was used by the Celera Genomics Corporation to sequence the human genome.

Choose correct answer/s
A
FISH
B
whole-genome shotgun
C
clone contig
D
radiation hybrid
E
pedigree analysis
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Question 18
Multiple Choice

Candidate open reading frames of a genome are identified by searching for

Choose correct answer/s
A
a start codon "in frame" with a stop codon.
B
a start codon.
C
introns and exons.
D
a promoter.
E
All of these
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Question 19
Multiple Choice

Successful insertion of a DNA fragment into the polylinker region of pBluescript II is detected by

Choose correct answer/s
A
production of the enzyme β-galactosidase.
B
absence of the enzyme β-galactosidase.
C
the increased size of the plasmid.
D
autoradiography.
E
None of these
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Question 20
Multiple Choice

In gel electrophoresis,which of the following DNA fragments would travel the farthest distance from the sample well?

Choose correct answer/s
A
ATCCCGAT
B
ATCCCG
C
ATCC
D
AT
E
ATCCCGATTGCACGTT
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